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cxxc4 CXXC finger 4 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108233103, updated on 10-Apr-2024

Summary

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Gene symbol
cxxc4
Gene description
CXXC finger 4
See related
EnsemblRapid:ENSKMAG00010008294
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG3
Exon count:
4
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG3 NC_051432.1 (11936785..11970437, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094240.1 (3705923..3742135, complement)

Linkage Group LG3 - NC_051432.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4) Neighboring gene methylthioadenosine phosphorylase Neighboring gene cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4) Neighboring gene tet methylcytosine dioxygenase 2 Neighboring gene inorganic pyrophosphatase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyl-CpG binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CXXC-type zinc finger protein 4
Names
CXXC finger protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051432.1 Reference ASM164957v2 Primary Assembly

    Range
    11936785..11970437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411362.3 → XP_017266851.1  CXXC-type zinc finger protein 4

    UniProtKB/TrEMBL
    A0A3Q2ZDI7
    Conserved Domains (1) summary
    pfam02008
    Location:223 → 263
    zf-CXXC; CXXC zinc finger domain

  2. XM_017411449.3 → XP_017266938.1  CXXC-type zinc finger protein 4

    UniProtKB/TrEMBL
    A0A3Q2ZDI7
    Related
    ENSKMAP00010017882.1, ENSKMAT00010018534.1
    Conserved Domains (1) summary
    pfam02008
    Location:223 → 263
    zf-CXXC; CXXC zinc finger domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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