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pigk phosphatidylinositol glycan anchor biosynthesis, class K [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108232922, updated on 10-Apr-2024

Summary

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Gene symbol
pigk
Gene description
phosphatidylinositol glycan anchor biosynthesis, class K
See related
EnsemblRapid:ENSKMAG00010014873
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG20
Exon count:
11
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG20 NC_051449.1 (4313949..4344771, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094257.1 (1688960..1719766, complement)

Linkage Group LG20 - NC_051449.1Genomic Context describing neighboring genes Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a Neighboring gene adenylate kinase 5 Neighboring gene uncharacterized LOC119616612 Neighboring gene zinc finger, ZZ-type containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GPI-anchor transamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI-anchor transamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051449.1 Reference ASM164957v2 Primary Assembly

    Range
    4313949..4344771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411055.3 → XP_017266544.1  GPI-anchor transamidase

    UniProtKB/TrEMBL
    A0A3Q3B6E1, A0A3Q3GNU9
    Related
    ENSKMAP00010032888.1, ENSKMAT00010034203.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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