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SNX3 sorting nexin 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 107975233, updated on 17-Aug-2024

Summary

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Official Symbol
SNX3provided by VGNC
Official Full Name
sorting nexin 3provided by VGNC
Primary source
VGNC:VGNC:3706
Locus tag
CK820_G0000586
See related
Ensembl:ENSPTRG00000018473 Ensembl:ENSPTRG00000046352
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (120122087..120172154, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (120120570..120170637, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene osteoclastogenesis associated transmembrane protein 1 Neighboring gene nuclear receptor subfamily 2 group E member 1 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene AFG1 like ATPase Neighboring gene mitochondrial import receptor subunit TOM5 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    120122087..120172154 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001149032.7 → XP_001149032.1  sorting nexin-3 isoform X1

    See identical proteins and their annotated locations for XP_001149032.1

    UniProtKB/TrEMBL
    A0A2J8PUN4, A0A6D2Y5V7, H2QTI3
    Related
    ENSPTRP00000067936.1
    Conserved Domains (1) summary
    cd07293
    Location:28 → 150
    PX_SNX3; The phosphoinositide binding Phox Homology domain of Sorting Nexin 3

  2. XM_016945032.4 → XP_016800521.1  sorting nexin-3 isoform X2

    UniProtKB/TrEMBL
    A0A2J8PUN2
    Conserved Domains (1) summary
    cl02563
    Location:28 → 86
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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