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trappc8 trafficking protein particle complex subunit 8 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107687171, updated on 14-Mar-2024

Summary

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Gene symbol
trappc8
Gene description
trafficking protein particle complex subunit 8
See related
Ensembl:ENSSANG00000009287
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015540070.1 (291043..354713, complement)

NW_015540070.1Genomic Context describing neighboring genes Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 Neighboring gene opsin-5-like Neighboring gene uncharacterized LOC107687193 Neighboring gene meprin A subunit beta-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015540070.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPPIII protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 8
Names
trafficking protein particle complex 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015540070.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    291043..354713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016484393.1 → XP_016339879.1  trafficking protein particle complex subunit 8 isoform X4

    UniProtKB/TrEMBL
    A0A671LLU7
    Related
    ENSSANP00000019285.1, ENSSANT00000020572.1

  2. XM_016484391.1 → XP_016339877.1  trafficking protein particle complex subunit 8 isoform X2

    UniProtKB/TrEMBL
    A0A671LLU7

  3. XM_016484392.1 → XP_016339878.1  trafficking protein particle complex subunit 8 isoform X3

    UniProtKB/TrEMBL
    A0A671LJ96, A0A671LLU7
    Related
    ENSSANP00000019271.1, ENSSANT00000020559.1

  4. XM_016484390.1 → XP_016339876.1  trafficking protein particle complex subunit 8 isoform X1

    UniProtKB/TrEMBL
    A0A671LLU7

  5. XM_016484396.1 → XP_016339882.1  trafficking protein particle complex subunit 8 isoform X5

    UniProtKB/TrEMBL
    A0A671LLU7

  6. XM_016484395.1 → XP_016339881.1  trafficking protein particle complex subunit 8 isoform X5

    UniProtKB/TrEMBL
    A0A671LLU7
Nucleotide Protein
Heading Accession and Version

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