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adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 [ Sinocyclocheilus grahami ]

Gene ID: 107557255, updated on 14-Mar-2024

Summary

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Gene symbol
adamts5
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 5
See related
Ensembl:ENSSGRG00000036767
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505774.1 (400218..458227)

NW_015505774.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107557252 Neighboring gene sodium- and chloride-dependent GABA transporter 2-like Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 1 Neighboring gene cysteine/tyrosine-rich 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505774.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505774.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    400218..458227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016240613.1 → XP_016096099.1  A disintegrin and metalloproteinase with thrombospondin motifs 5

    UniProtKB/TrEMBL
    A0A672Q702, A0A672Q9V6
    Related
    ENSSGRP00000072075.1, ENSSGRT00000076763.1
Nucleotide Protein
Heading Accession and Version

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