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PKD2L2 polycystin 2 like 2, transient receptor potential cation channel [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107518714, updated on 30-Mar-2024

Summary

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Gene symbol
PKD2L2
Gene description
polycystin 2 like 2, transient receptor potential cation channel
Locus tag
HJG63_015376
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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See PKD2L2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416310.1 (98786035..98811852, complement)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494720.1 (914777..939604, complement)

NW_023416310.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 8A Neighboring gene family with sequence similarity 13 member B Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene kelch like family member 3 Neighboring gene myotilin Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease 2-like 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416310.1 Reference mRouAeg1.p

    Range
    98786035..98811852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016160636.2 → XP_016016122.1  polycystic kidney disease 2-like 2 protein

    UniProtKB/TrEMBL
    A0A7J8FKZ0, A0A7J8FLP0
    Conserved Domains (1) summary
    pfam08016
    Location:77 → 497
    PKD_channel; Polycystin cation channel
Nucleotide Protein
Heading Accession and Version

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