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ltbp1 latent transforming growth factor beta binding protein 1 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107375474, updated on 6-Jun-2024

Summary

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Gene symbol
ltbp1
Gene description
latent transforming growth factor beta binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539927.1 (10037858..10182577)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr03 NC_029651.1 (10964978..11111066)

NW_026539927.1Genomic Context describing neighboring genes Neighboring gene baculoviral IAP repeat containing 6 Neighboring gene uncharacterized LOC129166747 Neighboring gene tetratricopeptide repeat domain 27 Neighboring gene uncharacterized LOC129166746 Neighboring gene oocyte zinc finger protein XlCOF20 Neighboring gene zinc transporter ZIP9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
latent-transforming growth factor beta-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539927.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    10037858..10182577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054749984.1 → XP_054605959.1  latent-transforming growth factor beta-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A9D2YFQ4

  2. XM_054749982.1 → XP_054605957.1  latent-transforming growth factor beta-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9D2YFQ4

  3. XM_054749983.1 → XP_054605958.1  latent-transforming growth factor beta-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9D2YFQ4

  4. XM_054749985.1 → XP_054605960.1  latent-transforming growth factor beta-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A9D2YFQ4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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