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NPM1 nucleophosmin 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107320456, updated on 14-Mar-2024

Summary

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Gene symbol
NPM1
Gene description
nucleophosmin 1
See related
Ensembl:ENSCJPG00005011356
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 13 NC_029528.1 (13571927..13583232)

Chromosome 13 - NC_029528.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107320483 Neighboring gene uncharacterized LOC107320482 Neighboring gene T cell leukemia homeobox 3 Neighboring gene fibroblast growth factor 18 Neighboring gene uncharacterized LOC107320433 Neighboring gene uncharacterized LOC107320432

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029528.1 Chromosome 13 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleophosmin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029528.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    13571927..13583232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015876350.2 → XP_015731836.1  nucleophosmin

    UniProtKB/TrEMBL
    A0A8C2TGT3
    Related
    ENSCJPP00005013469.1, ENSCJPT00005019336.1
    Conserved Domains (2) summary
    pfam03066
    Location:17 → 121
    Nucleoplasmin; Nucleoplasmin
    pfam16276
    Location:245 → 293
    NPM1-C; Nucleophosmin C-terminal domain
Nucleotide Protein
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