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ZFYVE16 zinc finger FYVE-type containing 16 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107306531, updated on 14-Mar-2024

Summary

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Gene symbol
ZFYVE16
Gene description
zinc finger FYVE-type containing 16
See related
Ensembl:ENSCJPG00005000738
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) Z NC_029547.1 (57122736..57151448, complement)

Chromosome Z - NC_029547.1Genomic Context describing neighboring genes Neighboring gene dihydrofolate reductase Neighboring gene ankyrin repeat domain 34B Neighboring gene family with sequence similarity 151 member B Neighboring gene coiled-coil domain containing 125 Neighboring gene adenylate kinase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029547.1 Chromosome Z Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029547.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    57122736..57151448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015849776.2 → XP_015705262.1  LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 16

    UniProtKB/TrEMBL
    A0A8C2SQL5
    Related
    ENSCJPP00005001100.1, ENSCJPT00005001889.1
    Conserved Domains (3) summary
    pfam09528
    Location:238 → 681
    Ehrlichia_rpt; Ehrlichia tandem repeat (Ehrlichia_rpt)
    cd15729
    Location:689 → 754
    FYVE_endofin; FYVE domain found in endofin and similar proteins
    pfam11979
    Location:1089 → 1437
    DUF3480; Domain of unknown function (DUF3480)
Nucleotide Protein
Heading Accession and Version

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