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KLF15 KLF transcription factor 15 [ Parus major (Great Tit) ]

Gene ID: 107210306, updated on 3-Aug-2024

Summary

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Gene symbol
KLF15
Gene description
KLF transcription factor 15
See related
Ensembl:ENSPMJG00000012823
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 12 NC_031781.1 (10466699..10480334, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 12 NC_029281.1 (10466699..10480333, complement)

Chromosome 12 - NC_031781.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107210496 Neighboring gene carbohydrate sulfotransferase 13 Neighboring gene solute carrier family 41 member 3 Neighboring gene cilia and flagella associated protein 100 Neighboring gene ZXD family zinc finger C Neighboring gene urocanate hydratase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 15
Names
Kruppel like factor 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031781.1 Reference Parus_major1.1 Primary Assembly

    Range
    10466699..10480334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015640964.2 → XP_015496450.1  Krueppel-like factor 15 isoform X2

    Related
    ENSPMJP00000017015.1, ENSPMJT00000022254.1
    Conserved Domains (4) summary
    sd00017
    Location:310 → 332
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:308 → 332
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:354 → 379
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:310 → 389
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_033517460.1 → XP_033373351.1  Krueppel-like factor 15 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:417 → 512
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:434 → 456
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21580
    Location:127 → 432
    KLF15_N; N-terminal domain of Kruppel-like factor 15
Nucleotide Protein
Heading Accession and Version

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