U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRMT11 tRNA methyltransferase 11 homolog [ Parus major (Great Tit) ]

Gene ID: 107201886, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TRMT11
Gene description
tRNA methyltransferase 11 homolog
See related
Ensembl:ENSPMJG00000013658
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 3 NC_031770.1 (61210919..61235413, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 3 NC_029270.1 (61210919..61235409, complement)

Chromosome 3 - NC_031770.1Genomic Context describing neighboring genes Neighboring gene R-spondin 3 Neighboring gene centromere protein W Neighboring gene uncharacterized LOC107202029 Neighboring gene histidine triad nucleotide binding protein 3 Neighboring gene nuclear receptor coactivator 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tRNA (guanine(10)-N2)-methyltransferase homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031770.1 Reference Parus_major1.1 Primary Assembly

    Range
    61210919..61235413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015621874.3 → XP_015477360.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1

    Related
    ENSPMJP00000018240.1, ENSPMJT00000023828.1
    Conserved Domains (3) summary
    COG1041
    Location:17 → 414
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
    cl12076
    Location:82 → 152
    THUMP; THUMP domain, predicted to bind RNA
    cl17173
    Location:191 → 315
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_015621875.2 → XP_015477361.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2

    Related
    ENSPMJP00000018243.1, ENSPMJT00000023833.1
    Conserved Domains (2) summary
    cl12076
    Location:44 → 114
    THUMP; THUMP domain, predicted to bind RNA
    cl17173
    Location:153 → 277
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_033512809.1 → XP_033368700.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X4

    Conserved Domains (1) summary
    COG1041
    Location:40 → 316
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

  4. XM_033512810.1 → XP_033368701.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X5

    Conserved Domains (1) summary
    COG1041
    Location:1 → 215
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

  5. XM_033512808.1 → XP_033368699.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X3

    Conserved Domains (1) summary
    COG1041
    Location:17 → 374
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.