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SMYD5 SMYD family member 5 [ Parus major (Great Tit) ]

Gene ID: 107198903, updated on 3-Aug-2024

Summary

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Gene symbol
SMYD5
Gene description
SMYD family member 5
See related
Ensembl:ENSPMJG00000004150
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) Unplaced Scaffold NW_015379292.1 (87940..97118)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) Unplaced Scaffold NW_015379292.1 (87939..97118)

NW_015379292.1Genomic Context describing neighboring genes Neighboring gene RAB11 family interacting protein 5 Neighboring gene uncharacterized LOC117243782 Neighboring gene protease associated domain containing 1 Neighboring gene chaperonin containing TCP1 subunit 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4K20 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SET and MYND domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NW_015379292.1 Reference Parus_major1.1 Primary Assembly

    Range
    87940..97118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015616173.2 → XP_015471659.1  SET and MYND domain-containing protein 5

    Related
    ENSPMJP00000004812.1, ENSPMJT00000006735.1
    Conserved Domains (3) summary
    smart00317
    Location:284 → 341
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam00856
    Location:23 → 48
    SET; SET domain
    pfam15371
    Location:58 → 135
    DUF4599; Domain of unknown function (DUF4599)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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