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CADM3 cell adhesion molecule 3 [ Parus major (Great Tit) ]

Gene ID: 107198848, updated on 3-Aug-2024

Summary

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Gene symbol
CADM3
Gene description
cell adhesion molecule 3
See related
Ensembl:ENSPMJG00000002571
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) Unplaced Scaffold NW_015379284.1 (87238..107165)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) Unplaced Scaffold NW_015379284.1 (87237..107165)

NW_015379284.1Genomic Context describing neighboring genes Neighboring gene glycosylated lysosomal membrane protein Neighboring gene uncharacterized LOC107198852 Neighboring gene uncharacterized LOC117243780 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene serum amyloid P-component-like Neighboring gene atypical chemokine receptor 1 (Duffy blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell adhesion molecule 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NW_015379284.1 Reference Parus_major1.1 Primary Assembly

    Range
    87238..107165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015616079.3 → XP_015471565.1  cell adhesion molecule 3 isoform X1

    Related
    ENSPMJP00000002887.1, ENSPMJT00000004161.1
    Conserved Domains (3) summary
    smart00410
    Location:32 → 122
    IG_like; Immunoglobulin like
    pfam13927
    Location:232 → 299
    Ig_3; Immunoglobulin domain
    cl11960
    Location:28 → 122
    Ig; Immunoglobulin domain

  2. XM_015616080.3 → XP_015471566.1  cell adhesion molecule 3 isoform X2

    Related
    ENSPMJP00000002892.1, ENSPMJT00000004166.1
    Conserved Domains (3) summary
    smart00410
    Location:32 → 122
    IG_like; Immunoglobulin like
    pfam13927
    Location:232 → 299
    Ig_3; Immunoglobulin domain
    cl11960
    Location:28 → 122
    Ig; Immunoglobulin domain

  3. XM_015616081.2 → XP_015471567.1  cell adhesion molecule 3 isoform X3

    Conserved Domains (3) summary
    smart00410
    Location:32 → 122
    IG_like; Immunoglobulin like
    pfam13927
    Location:232 → 299
    Ig_3; Immunoglobulin domain
    cl11960
    Location:28 → 122
    Ig; Immunoglobulin domain

  4. XM_015616082.2 → XP_015471568.1  cell adhesion molecule 3 isoform X4

    Conserved Domains (4) summary
    smart00294
    Location:350 → 365
    4.1m; putative band 4.1 homologues' binding motif
    smart00410
    Location:32 → 122
    IG_like; Immunoglobulin like
    pfam13927
    Location:232 → 299
    Ig_3; Immunoglobulin domain
    cl11960
    Location:28 → 122
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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