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Trip6 thyroid hormone receptor interactor 6 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107147084, updated on 14-Mar-2024

Summary

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Gene symbol
Trip6
Gene description
thyroid hormone receptor interactor 6
See related
Ensembl:ENSMMMG00000011815
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Trip6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000185.1 (29389547..29393114, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351238.1 (29389554..29392806, complement)

NW_026000185.1Genomic Context describing neighboring genes Neighboring gene UFM1 specific peptidase 1 Neighboring gene serrate, RNA effector molecule Neighboring gene solute carrier family 12 member 9 Neighboring gene EPH receptor B4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid receptor-interacting protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000185.1 Reference marMar

    Range
    29389547..29393114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015491489.2 → XP_015346975.1  thyroid receptor-interacting protein 6

    UniProtKB/TrEMBL
    A0A8C5ZEL8
    Related
    ENSMMMP00000013234.1
    Conserved Domains (3) summary
    cd09350
    Location:287 → 340
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cd09357
    Location:407 → 469
    LIM3_Zyxin_like; The third LIM domain of Zyxin-like family
    cl02475
    Location:347 → 406
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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