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Thbd thrombomodulin [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107140439, updated on 14-Mar-2024

Summary

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Gene symbol
Thbd
Gene description
thrombomodulin
See related
Ensembl:ENSMMMG00000004391
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Thbd in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000026.1 (47021933..47026076, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351210.1 (47023462..47026004, complement)

NW_026000026.1Genomic Context describing neighboring genes Neighboring gene forkhead box A2 Neighboring gene uncharacterized LOC125619065 Neighboring gene somatostatin receptor 4 Neighboring gene CD93 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thrombomodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000026.1 Reference marMar

    Range
    47021933..47026076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015483516.2 → XP_015339002.1  thrombomodulin

    UniProtKB/TrEMBL
    A0A8C5YU59
    Related
    ENSMMMP00000004801.1
    Conserved Domains (5) summary
    smart00179
    Location:325 → 356
    EGF_CA; Calcium-binding EGF-like domain
    pfam06247
    Location:347 → 481
    Plasmod_Pvs28; Plasmodium ookinete surface protein Pvs28
    pfam09064
    Location:406 → 439
    Tme5_EGF_like; Thrombomodulin like fifth domain, EGF-like
    pfam14670
    Location:289 → 323
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:30 → 170
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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