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Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107137900, updated on 1-Aug-2024

Summary

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Gene symbol
Adamts7
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 7
See related
Ensembl:ENSMMMG00000000900
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000229.1 (4574185..4620436)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351217.1 (4574208..4620378)

NW_026000229.1Genomic Context describing neighboring genes Neighboring gene mortality factor 4 like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene TBC1 domain family member 2B Neighboring gene c-Myc-binding protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000229.1 Reference marMar

    Range
    4574185..4620436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015480352.2 → XP_015335838.1  A disintegrin and metalloproteinase with thrombospondin motifs 7

    UniProtKB/TrEMBL
    A0A8C5YKG4, A0AAJ7ET40
    Related
    ENSMMMP00000001000.1
    Conserved Domains (6) summary
    smart00209
    Location:541 → 593
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:242 → 449
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01421
    Location:242 → 452
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:68 → 183
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:699 → 809
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:512 → 672
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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