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BRF2 BRF2 RNA polymerase III transcription initiation factor subunit [ Gekko japonicus ]

Gene ID: 107112807, updated on 14-Mar-2024

Summary

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Gene symbol
BRF2
Gene description
BRF2 RNA polymerase III transcription initiation factor subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015167605.1 (101465..108948)

NW_015167605.1Genomic Context describing neighboring genes Neighboring gene prolactin releasing hormone receptor Neighboring gene RAB11 family interacting protein 1 Neighboring gene adhesion G protein-coupled receptor A2 Neighboring gene pyridoxal phosphate binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015167605.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor IIIB 50 kDa subunit
Names
BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015167605.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    101465..108948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015413998.1 → XP_015269484.1  transcription factor IIIB 50 kDa subunit

    Conserved Domains (2) summary
    COG1405
    Location:5 → 233
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam08271
    Location:5 → 37
    TF_Zn_Ribbon; TFIIB zinc-binding
Nucleotide Protein
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