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dera deoxyribose-phosphate aldolase (putative) [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107101085, updated on 14-Mar-2024

Summary

Gene symbol
dera
Gene description
deoxyribose-phosphate aldolase (putative)
See related
Ensembl:ENSCVAG00000019792
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015151505.1 (8382..20981)

NW_015151505.1Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase B3 Neighboring gene LIM domain only 3 Neighboring gene repetitive proline-rich cell wall protein-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015151505.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

General protein information

Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015151505.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    8382..20981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015399846.1XP_015255332.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A3Q2EGI3
    Related
    ENSCVAP00000030899.1, ENSCVAT00000032038.1
    Conserved Domains (1) summary
    cl21457
    Location:53237
    TIM_phosphate_binding; TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate ...