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lyar Ly1 antibody reactive homolog (mouse) [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107100164, updated on 14-Mar-2024

Summary

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Gene symbol
lyar
Gene description
Ly1 antibody reactive homolog (mouse)
See related
Ensembl:ENSCVAG00000023289
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150482.1 (2169783..2174114)

NW_015150482.1Genomic Context describing neighboring genes Neighboring gene synaptoporin a Neighboring gene zinc finger and BTB domain containing 49 Neighboring gene transmembrane protein 128 Neighboring gene otopetrin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150482.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell growth-regulating nucleolar protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150482.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    2169783..2174114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015398556.1 → XP_015254042.1  cell growth-regulating nucleolar protein

    UniProtKB/TrEMBL
    A0A3Q2GS00
    Related
    ENSCVAP00000032895.1, ENSCVAT00000033340.1
    Conserved Domains (1) summary
    pfam08790
    Location:31 → 58
    zf-LYAR; LYAR-type C2HC zinc finger
Nucleotide Protein
Heading Accession and Version

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