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arhgef10 Rho guanine nucleotide exchange factor (GEF) 10 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107098881, updated on 14-Mar-2024

Summary

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Gene symbol
arhgef10
Gene description
Rho guanine nucleotide exchange factor (GEF) 10
See related
Ensembl:ENSCVAG00000009603
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150480.1 (526688..599417, complement)

NW_015150480.1Genomic Context describing neighboring genes Neighboring gene AT-rich interactive domain-containing protein 1A-like Neighboring gene kelch repeat and BTB domain containing 11 Neighboring gene CLN8 transmembrane ER and ERGIC protein Neighboring gene discs, large (Drosophila) homolog-associated protein 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150480.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of stress fiber assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 10
Names
Rho guanine nucleotide exchange factor 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150480.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    526688..599417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015396764.1 → XP_015252250.1  rho guanine nucleotide exchange factor 10 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2FQ29
    Conserved Domains (2) summary
    pfam00621
    Location:499 → 677
    RhoGEF; RhoGEF domain
    cl17171
    Location:709 → 811
    PH-like; Pleckstrin homology-like domain

  2. XM_015396787.1 → XP_015252273.1  rho guanine nucleotide exchange factor 10 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2FQ29, A0A3Q2FQ41
    Related
    ENSCVAP00000007795.1, ENSCVAT00000002699.1
    Conserved Domains (2) summary
    pfam00621
    Location:460 → 638
    RhoGEF; RhoGEF domain
    cl17171
    Location:670 → 772
    PH-like; Pleckstrin homology-like domain

  3. XM_015396778.1 → XP_015252264.1  rho guanine nucleotide exchange factor 10 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2FQ29
    Conserved Domains (2) summary
    pfam00621
    Location:460 → 638
    RhoGEF; RhoGEF domain
    cl17171
    Location:670 → 772
    PH-like; Pleckstrin homology-like domain

  4. XM_015396755.1 → XP_015252241.1  rho guanine nucleotide exchange factor 10 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2FQ29
    Conserved Domains (2) summary
    pfam00621
    Location:499 → 677
    RhoGEF; RhoGEF domain
    cl17171
    Location:709 → 811
    PH-like; Pleckstrin homology-like domain

  5. XM_015396770.1 → XP_015252256.1  rho guanine nucleotide exchange factor 10 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2DYZ1, A0A3Q2FQ29
    Related
    ENSCVAP00000025032.1, ENSCVAT00000002677.1
    Conserved Domains (2) summary
    pfam00621
    Location:499 → 677
    RhoGEF; RhoGEF domain
    cl17171
    Location:709 → 811
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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