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foxg1a forkhead box G1a [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107096055, updated on 14-Mar-2024

Summary

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Gene symbol
foxg1a
Gene description
forkhead box G1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
foxg1
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015151048.1 (463062..464606)

NW_015151048.1Genomic Context describing neighboring genes Neighboring gene F-box protein 34 Neighboring gene jumonji domain containing 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015151048.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein G1
Names
forkhead box G1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015151048.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    463062..464606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015392542.1 → XP_015248028.1  forkhead box protein G1

    UniProtKB/TrEMBL
    A0A3Q2CJK1
    Conserved Domains (1) summary
    smart00339
    Location:111 → 199
    FH; FORKHEAD
Nucleotide Protein
Heading Accession and Version

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