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si:ch211-45c16.2 mitogen-activated protein kinase kinase kinase 13 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107091898, updated on 12-Sep-2024

Summary

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Gene symbol
si:ch211-45c16.2
Gene description
mitogen-activated protein kinase kinase kinase 13
See related
Ensembl:ENSCVAG00000019010
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
map3k13
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150809.1 (633911..677807)

NW_015150809.1Genomic Context describing neighboring genes Neighboring gene CASP8 and FADD like apoptosis regulator Neighboring gene family with sequence similarity 126 member B Neighboring gene transient receptor potential cation channel, subfamily M, member 2 Neighboring gene uncharacterized LOC107091901 Neighboring gene phosphofructokinase, liver a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150809.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables JUN kinase kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase kinase kinase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150809.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    633911..677807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015386110.1 → XP_015241596.1  mitogen-activated protein kinase kinase kinase 13

    UniProtKB/TrEMBL
    A0A3Q2DBG0, A0A3Q2EDS2
    Related
    ENSCVAP00000016118.1, ENSCVAT00000024413.1
    Conserved Domains (2) summary
    smart00219
    Location:216 → 455
    TyrKc; Tyrosine kinase, catalytic domain
    cd14059
    Location:222 → 458
    STKc_MAP3K12_13; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13

  2. XM_015386109.1 → XP_015241595.1  mitogen-activated protein kinase kinase kinase 13

    UniProtKB/TrEMBL
    A0A3Q2DBG0, A0A3Q2EDS2
    Related
    ENSCVAP00000030456.1, ENSCVAT00000024373.1
    Conserved Domains (2) summary
    smart00219
    Location:216 → 455
    TyrKc; Tyrosine kinase, catalytic domain
    cd14059
    Location:222 → 458
    STKc_MAP3K12_13; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13

  3. XM_015386108.1 → XP_015241594.1  mitogen-activated protein kinase kinase kinase 13

    UniProtKB/TrEMBL
    A0A3Q2DBG0, A0A3Q2EDS2
    Related
    ENSCVAP00000016114.1, ENSCVAT00000024385.1
    Conserved Domains (2) summary
    smart00219
    Location:216 → 455
    TyrKc; Tyrosine kinase, catalytic domain
    cd14059
    Location:222 → 458
    STKc_MAP3K12_13; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13
Nucleotide Protein
Heading Accession and Version

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