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LRCH4 leucine rich repeats and calponin homology domain containing 4 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106987413, updated on 13-Mar-2024

Summary

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Gene symbol
LRCH4
Gene description
leucine rich repeats and calponin homology domain containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See LRCH4 in Genome Data Viewer
Location:
chromosome: E3
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E3 NC_069398.1 (28840476..28852461)

Chromosome E3 - NC_069398.1Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 3 Neighboring gene procollagen C-endopeptidase enhancer Neighboring gene F-box protein 24 Neighboring gene insulin receptor substrate 1-like Neighboring gene Sin3A associated protein 25 Neighboring gene ArfGAP with FG repeats 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069398.1 Chromosome E3 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and calponin homology domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069398.1 Reference VMU_Ajub_asm_v1.0

    Range
    28840476..28852461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027042077.2 → XP_026897878.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XZC2
    Conserved Domains (3) summary
    smart00033
    Location:560 → 652
    CH; Calponin homology domain
    COG4886
    Location:74 → 255
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:46 → 69
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_053213488.1 → XP_053069463.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X3

  3. XM_027042079.2 → XP_026897880.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A6J1Y068
    Conserved Domains (3) summary
    smart00033
    Location:560 → 651
    CH; Calponin homology domain
    COG4886
    Location:74 → 255
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:46 → 69
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_027042078.2 → XP_026897879.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A6J1XZM6
    Conserved Domains (3) summary
    smart00033
    Location:545 → 637
    CH; Calponin homology domain
    COG4886
    Location:74 → 255
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:46 → 69
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_027042080.2 → XP_026897881.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A6J1XZ98
    Conserved Domains (3) summary
    smart00033
    Location:545 → 636
    CH; Calponin homology domain
    COG4886
    Location:74 → 255
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:46 → 69
    LRR_RI; leucine-rich repeat [structural motif]

  6. XM_053213489.1 → XP_053069464.1  leucine-rich repeat and calponin homology domain-containing protein 4 isoform X6

Nucleotide Protein
Heading Accession and Version

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