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VANGL2 VANGL planar cell polarity protein 2 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106978542, updated on 6-Jun-2024

Summary

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Gene symbol
VANGL2
Gene description
VANGL planar cell polarity protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E4 NC_069395.1 (4973021..4998089)

Chromosome E4 - NC_069395.1Genomic Context describing neighboring genes Neighboring gene nicastrin Neighboring gene nescient helix-loop-helix 1 Neighboring gene uncharacterized LOC128313093 Neighboring gene uncharacterized LOC128313094 Neighboring gene SLAM family member 6 Neighboring gene CD84 molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069395.1 Chromosome E4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Wnt signaling pathway, planar cell polarity pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of planar polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vang-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069395.1 Reference VMU_Ajub_asm_v1.0

    Range
    4973021..4998089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053209643.1 → XP_053065618.1  vang-like protein 2

    UniProtKB/TrEMBL
    A0A6J1YGP7, A0A6J1YIW5

  2. XM_027048409.2 → XP_026904210.1  vang-like protein 2

    UniProtKB/TrEMBL
    A0A6J1YGP7, A0A6J1YIW5
    Conserved Domains (1) summary
    pfam06638
    Location:34 → 521
    Strabismus; Strabismus protein

  3. XM_053209642.1 → XP_053065617.1  vang-like protein 2

    UniProtKB/TrEMBL
    A0A6J1YGP7, A0A6J1YIW5

  4. XM_053209641.1 → XP_053065616.1  vang-like protein 2

    UniProtKB/TrEMBL
    A0A6J1YGP7, A0A6J1YIW5
Nucleotide Protein
Heading Accession and Version

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