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NFATC1 nuclear factor of activated T cells 1 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106977679, updated on 6-Jun-2024

Summary

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Gene symbol
NFATC1
Gene description
nuclear factor of activated T cells 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: D3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) D3 NC_069392.1 (91745288..91847960)

Chromosome D3 - NC_069392.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113602369 Neighboring gene ATPase phospholipid transporting 9B (putative) Neighboring gene uncharacterized LOC128312404 Neighboring gene uncharacterized LOC106973140 Neighboring gene CTD phosphatase subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069392.1 Chromosome D3 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor of activated T-cells, cytoplasmic 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069392.1 Reference VMU_Ajub_asm_v1.0

    Range
    91745288..91847960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053206086.1 → XP_053062061.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X5

    UniProtKB/TrEMBL
    A0A6J2A913

  2. XM_027069223.2 → XP_026925024.2  nuclear factor of activated T-cells, cytoplasmic 1 isoform X4

    UniProtKB/TrEMBL
    A0A6J2A918

  3. XM_027069218.2 → XP_026925019.2  nuclear factor of activated T-cells, cytoplasmic 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J2A913

  4. XM_027069219.2 → XP_026925020.2  nuclear factor of activated T-cells, cytoplasmic 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J2A9G6

  5. XM_027069222.2 → XP_026925023.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X3

    UniProtKB/TrEMBL
    A0A6J2A6A0, A0A6J2A913
    Conserved Domains (2) summary
    cd07881
    Location:402 → 576
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:581 → 681
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
Nucleotide Protein
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