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TRIM35 tripartite motif containing 35 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106973107, updated on 13-Mar-2024

Summary

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Gene symbol
TRIM35
Gene description
tripartite motif containing 35
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B1 NC_069382.1 (47404783..47432113, complement)

Chromosome B1 - NC_069382.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 122 Neighboring gene stathmin 4 Neighboring gene protein tyrosine kinase 2 beta Neighboring gene uncharacterized LOC113603130 Neighboring gene cholinergic receptor nicotinic alpha 2 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069382.1 Chromosome B1 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069382.1 Reference VMU_Ajub_asm_v1.0

    Range
    47404783..47432113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027070204.2 → XP_026926005.1  E3 ubiquitin-protein ligase TRIM35 isoform X2

    UniProtKB/TrEMBL
    A0A6J2ACA8
    Conserved Domains (4) summary
    cd00162
    Location:21 → 60
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl00034
    Location:96 → 139
    Bbox_SF; B-box-type zinc finger superfamily
    cl02614
    Location:226 → 405
    SPRY; SPRY domain
    cl17238
    Location:18 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  2. XM_027070197.2 → XP_026925998.1  E3 ubiquitin-protein ligase TRIM35 isoform X1

    UniProtKB/TrEMBL
    A0A6J2A8Z5
    Conserved Domains (5) summary
    smart00502
    Location:145 → 268
    BBC; B-Box C-terminal domain
    cd00162
    Location:21 → 60
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl00034
    Location:96 → 139
    Bbox_SF; B-box-type zinc finger superfamily
    cl02614
    Location:303 → 482
    SPRY; SPRY domain
    cl17238
    Location:18 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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