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UBE3D ubiquitin protein ligase E3D [ Acinonyx jubatus (cheetah) ]

Gene ID: 106970136, updated on 6-Jun-2024

Summary

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Gene symbol
UBE3D
Gene description
ubiquitin protein ligase E3D
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B2 NC_069385.1 (76278898..76435569)

Chromosome B2 - NC_069385.1Genomic Context describing neighboring genes Neighboring gene malic enzyme 1 Neighboring gene transmembrane and coiled-coil domain-containing protein 3-like Neighboring gene RWD domain containing 2A Neighboring gene phosphoglucomutase 3 Neighboring gene DOP1 leucine zipper like protein A Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC128315588

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069385.1 Chromosome B2 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein monoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase E3D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069385.1 Reference VMU_Ajub_asm_v1.0

    Range
    76278898..76435569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053222527.1 → XP_053078502.1  E3 ubiquitin-protein ligase E3D isoform X2

    UniProtKB/TrEMBL
    A0A6J1ZA23

  2. XM_053222529.1 → XP_053078504.1  E3 ubiquitin-protein ligase E3D isoform X5

  3. XM_053222526.1 → XP_053078501.1  E3 ubiquitin-protein ligase E3D isoform X1

  4. XM_027057346.2 → XP_026913147.1  E3 ubiquitin-protein ligase E3D isoform X4

    UniProtKB/TrEMBL
    A0A6J1Z6K1, A0A6J1ZA23
    Conserved Domains (1) summary
    pfam09814
    Location:107 → 377
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

  5. XM_027057345.2 → XP_026913146.1  E3 ubiquitin-protein ligase E3D isoform X3

    UniProtKB/TrEMBL
    A0A6J1Z7B6, A0A6J1ZA23
    Conserved Domains (1) summary
    pfam09814
    Location:107 → 377
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

RNA

  1. XR_008298493.1 RNA Sequence

Nucleotide Protein
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