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NSMCE1 NSE1 homolog, SMC5-SMC6 complex component [ Acinonyx jubatus (cheetah) ]

Gene ID: 106966183, updated on 13-Mar-2024

Summary

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Gene symbol
NSMCE1
Gene description
NSE1 homolog, SMC5-SMC6 complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E3 NC_069398.1 (17004068..17034774, complement)

Chromosome E3 - NC_069398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106966159 Neighboring gene lysine demethylase 8 Neighboring gene uncharacterized LOC128313629 Neighboring gene uncharacterized LOC128313658

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069398.1 Chromosome E3 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-structural maintenance of chromosomes element 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069398.1 Reference VMU_Ajub_asm_v1.0

    Range
    17004068..17034774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053212891.1 → XP_053068866.1  non-structural maintenance of chromosomes element 1 homolog isoform X2

  2. XM_027051129.2 → XP_026906930.1  non-structural maintenance of chromosomes element 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A6J1YP52, A0A6J1YS67
    Conserved Domains (2) summary
    pfam07574
    Location:33 → 192
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
    cd16493
    Location:208 → 251
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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