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yars1 tyrosyl-tRNA synthetase 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106962192, updated on 13-Mar-2024

Summary

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Gene symbol
yars1
Gene description
tyrosyl-tRNA synthetase 1
See related
Ensembl:ENSPLAG00000020075
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
yars
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114000.1 (49240..55173)

NW_015114000.1Genomic Context describing neighboring genes Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid b Neighboring gene SOSS complex subunit C-like Neighboring gene NHS like 3 Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015114000.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tyrosine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tyrosyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114000.1 Reference P_latipinna-1.0

    Range
    49240..55173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015056441.1 → XP_014911927.1  tyrosine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3B3UTJ7
    Related
    ENSPLAP00000016007.1, ENSPLAT00000030889.1
    Conserved Domains (3) summary
    cd02799
    Location:367 → 472
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    TIGR00234
    Location:9 → 328
    tyrS; tyrosyl-tRNA synthetase
    cl00015
    Location:8 → 336
    nt_trans; nucleotidyl transferase superfamily

  2. XM_015056442.1 → XP_014911928.1  tyrosine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A3B3UTJ7
    Conserved Domains (3) summary
    cd02799
    Location:367 → 472
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    TIGR00234
    Location:9 → 328
    tyrS; tyrosyl-tRNA synthetase
    cl00015
    Location:8 → 336
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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