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eif5b eukaryotic translation initiation factor 5B [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106958936, updated on 13-Mar-2024

Summary

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Gene symbol
eif5b
Gene description
eukaryotic translation initiation factor 5B
See related
Ensembl:ENSPLAG00000015913
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113647.1 (179170..188835, complement)

NW_015113647.1Genomic Context describing neighboring genes Neighboring gene beta-carotene oxygenase 1, like Neighboring gene NACHT, LRR and PYD domains-containing protein 14-like Neighboring gene lipoyltransferase 1 Neighboring gene transcriptional-regulating factor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113647.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113647.1 Reference P_latipinna-1.0

    Range
    179170..188835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015051122.1 → XP_014906608.1  eukaryotic translation initiation factor 5B isoform X3

    Conserved Domains (5) summary
    cd01887
    Location:600 → 813
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:594 → 1170
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:934 → 1035
    IF-2; Translation-initiation factor 2
    cd03703
    Location:823 → 933
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1061 → 1154
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5

  2. XM_015051120.1 → XP_014906606.1  eukaryotic translation initiation factor 5B isoform X1

    UniProtKB/TrEMBL
    A0A3B3VRA7
    Related
    ENSPLAP00000027354.1, ENSPLAT00000020282.1
    Conserved Domains (5) summary
    cd01887
    Location:608 → 821
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:602 → 1178
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:942 → 1043
    IF-2; Translation-initiation factor 2
    cd03703
    Location:831 → 941
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1069 → 1162
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5

  3. XM_015051121.1 → XP_014906607.1  eukaryotic translation initiation factor 5B isoform X2

    UniProtKB/TrEMBL
    A0A3B3VR51
    Related
    ENSPLAP00000027352.1, ENSPLAT00000020266.1
    Conserved Domains (5) summary
    cd01887
    Location:600 → 813
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:594 → 1170
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:934 → 1035
    IF-2; Translation-initiation factor 2
    cd03703
    Location:823 → 933
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cd16266
    Location:1061 → 1154
    IF2_aeIF5B_IV; Domain IV of prokaryotic Initiation Factor 2 and archaeal and eukaryotic Initiation Factor 5
Nucleotide Protein
Heading Accession and Version

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