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clec11a C-type lectin domain containing 11A [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106951288, updated on 13-Mar-2024

Summary

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Gene symbol
clec11a
Gene description
C-type lectin domain containing 11A
See related
Ensembl:ENSPLAG00000001569
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See clec11a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113066.1 (52850..58310)

NW_015113066.1Genomic Context describing neighboring genes Neighboring gene gap junction Cx32.2 protein-like Neighboring gene selenoprotein L Neighboring gene chromosome unknown C1orf198 homolog Neighboring gene tetratricopeptide repeat domain 13 Neighboring gene ARV1 homolog, fatty acid homeostasis modulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113066.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-type lectin domain family 11 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113066.1 Reference P_latipinna-1.0

    Range
    52850..58310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015038725.1 → XP_014894211.1  C-type lectin domain family 11 member A

    UniProtKB/TrEMBL
    A0A3B3TJC5
    Related
    ENSPLAP00000000693.1, ENSPLAT00000016007.1
    Conserved Domains (2) summary
    cd03596
    Location:133 → 262
    CLECT_tetranectin_like; C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF)
    cl23721
    Location:32 → 109
    AP2Ec; AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of ...
Nucleotide Protein
Heading Accession and Version

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