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c1d C1D nuclear receptor corepressor [ Poecilia mexicana ]

Gene ID: 106927148, updated on 13-Mar-2024

Summary

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Gene symbol
c1d
Gene description
C1D nuclear receptor corepressor
See related
Ensembl:ENSPMEG00000023213
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095434.1 (304080..305974, complement)

NW_015095434.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106927139 Neighboring gene ETAA1 activator of ATR kinase Neighboring gene uncharacterized LOC106927147

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095434.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear nucleic acid-binding protein C1D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095434.1 Reference P_mexicana-1.0

    Range
    304080..305974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015002501.1 → XP_014857987.1  nuclear nucleic acid-binding protein C1D

    UniProtKB/TrEMBL
    A0A3B3XYD0
    Related
    ENSPMEP00000020114.1, ENSPMET00000034908.1
    Conserved Domains (1) summary
    pfam04000
    Location:18 → 95
    Sas10_Utp3; Sas10/Utp3/C1D family

  2. XM_015002503.1 → XP_014857989.1  nuclear nucleic acid-binding protein C1D

    UniProtKB/TrEMBL
    A0A3B3XYD0
    Conserved Domains (1) summary
    pfam04000
    Location:18 → 95
    Sas10_Utp3; Sas10/Utp3/C1D family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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