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asb6 ankyrin repeat and SOCS box containing 6 [ Poecilia mexicana ]

Gene ID: 106917659, updated on 2-Nov-2023

Summary

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Gene symbol
asb6
Gene description
ankyrin repeat and SOCS box containing 6
See related
Ensembl:ENSPMEG00000010987
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094772.1 (394768..400990, complement)

NW_015094772.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 13 Neighboring gene Carnitine O-acetyltransferase-like Neighboring gene immediate early response gene 5-like protein Neighboring gene uncharacterized LOC106917660

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094772.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-BARD1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094772.1 Reference P_mexicana-1.0

    Range
    394768..400990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014986804.1 → XP_014842290.1  ankyrin repeat and SOCS box protein 6

    UniProtKB/TrEMBL
    A0A3B3X293, A0A3B3X2M4
    Conserved Domains (4) summary
    cd00204
    Location:68 → 193
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:69 → 164
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:102 → 129
    ANK; ANK repeat [structural motif]
    cl02533
    Location:375 → 416
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

  2. XM_014986803.1 → XP_014842289.1  ankyrin repeat and SOCS box protein 6

    UniProtKB/TrEMBL
    A0A3B3X293, A0A3B3X2M4
    Related
    ENSPMEP00000009167.1, ENSPMET00000001253.1
    Conserved Domains (4) summary
    cd00204
    Location:68 → 193
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:69 → 164
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:102 → 129
    ANK; ANK repeat [structural motif]
    cl02533
    Location:375 → 416
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

  3. XM_014986805.1 → XP_014842291.1  ankyrin repeat and SOCS box protein 6

    UniProtKB/TrEMBL
    A0A3B3X293, A0A3B3X2M4
    Conserved Domains (4) summary
    cd00204
    Location:68 → 193
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:69 → 164
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:102 → 129
    ANK; ANK repeat [structural motif]
    cl02533
    Location:375 → 416
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
Nucleotide Protein
Heading Accession and Version

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