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tyms thymidylate synthetase [ Poecilia mexicana ]

Gene ID: 106915378, updated on 13-Mar-2024

Summary

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Gene symbol
tyms
Gene description
thymidylate synthetase
See related
Ensembl:ENSPMEG00000021800
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094667.1 (346087..348943)

NW_015094667.1Genomic Context describing neighboring genes Neighboring gene collectin subfamily member 12 Neighboring gene clusterin like 1 Neighboring gene YES proto-oncogene 1, Src family tyrosine kinase Neighboring gene enolase superfamily member 1 Neighboring gene adenylate cyclase activating polypeptide 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094667.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thymidylate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dTMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thymidylate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094667.1 Reference P_mexicana-1.0

    Range
    346087..348943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014982937.1 → XP_014838423.1  thymidylate synthase isoform X1

    Conserved Domains (1) summary
    pfam00303
    Location:42 → 380
    Thymidylat_synt; Thymidylate synthase

  2. XM_014982938.1 → XP_014838424.1  thymidylate synthase isoform X2

    Conserved Domains (1) summary
    pfam00303
    Location:42 → 353
    Thymidylat_synt; Thymidylate synthase

  3. XM_014982939.1 → XP_014838425.1  thymidylate synthase isoform X3

    Conserved Domains (1) summary
    pfam00303
    Location:42 → 349
    Thymidylat_synt; Thymidylate synthase

  4. XM_014982940.1 → XP_014838426.1  thymidylate synthase isoform X4

    UniProtKB/TrEMBL
    A0A3B3Z127
    Related
    ENSPMEP00000033332.1, ENSPMET00000034364.1
    Conserved Domains (1) summary
    pfam00303
    Location:42 → 322
    Thymidylat_synt; Thymidylate synthase
Nucleotide Protein
Heading Accession and Version

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