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henmt1 HEN methyltransferase 1 [ Poecilia mexicana ]

Gene ID: 106903774, updated on 13-Mar-2024

Summary

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Gene symbol
henmt1
Gene description
HEN methyltransferase 1
See related
Ensembl:ENSPMEG00000012549
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015096359.1 (99430..121193)

NW_015096359.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain-containing protein 7-like Neighboring gene uncharacterized LOC106903777 Neighboring gene family with sequence similarity 102 member Bb Neighboring gene solute carrier family 25 member 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015096359.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in siRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small RNA 2'-O-methyltransferase
Names
HEN1 methyltransferase homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015096359.1 Reference P_mexicana-1.0

    Range
    99430..121193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014967760.1 → XP_014823246.1  small RNA 2'-O-methyltransferase isoform X2

    Conserved Domains (1) summary
    TIGR04074
    Location:21 → 146
    bacter_Hen1; 3' terminal RNA ribose 2'-O-methyltransferase Hen1

  2. XM_014967759.1 → XP_014823245.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B3YLD2
    Related
    ENSPMEP00000027860.1, ENSPMET00000031055.1
    Conserved Domains (1) summary
    pfam12847
    Location:28 → 138
    Methyltransf_18; Methyltransferase domain

RNA

  1. XR_001414747.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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