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PLAU plasminogen activator, urokinase [ Calidris pugnax (ruff) ]

Gene ID: 106896322, updated on 3-Aug-2024

Summary

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Gene symbol
PLAU
Gene description
plasminogen activator, urokinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091042.1 (3820164..3837979, complement)

NW_015091042.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 3 subunit mu 1 Neighboring gene vinculin Neighboring gene calcium/calmodulin dependent protein kinase II gamma Neighboring gene N-deacetylase and N-sulfotransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091042.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in plasminogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
urokinase-type plasminogen activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091042.1 Reference ASM143184v1

    Range
    3820164..3837979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014956158.1 → XP_014811644.1  urokinase-type plasminogen activator

    Conserved Domains (3) summary
    smart00020
    Location:445 → 689
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:446 → 692
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    cl00100
    Location:107 → 185
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
Nucleotide Protein
Heading Accession and Version

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