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SLC25A13 solute carrier family 25 member 13 [ Calidris pugnax (ruff) ]

Gene ID: 106886972, updated on 3-Aug-2024

Summary

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Gene symbol
SLC25A13
Gene description
solute carrier family 25 member 13
See related
Ensembl:ENSCPUG00000009568
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090827.1 (1568683..1658069, complement)

NW_015090827.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase kinase 4 Neighboring gene dynein cytoplasmic 1 intermediate chain 1 Neighboring gene SEM1 26S proteasome subunit Neighboring gene uncharacterized LOC106886986

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090827.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in aspartate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate-aspartate shuttle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-binding mitochondrial carrier protein Aralar2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090827.1 Reference ASM143184v1

    Range
    1568683..1658069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014940302.1 → XP_014795788.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X3

    Related
    ENSCPUP00000013517.1, ENSCPUT00000016120.1
    Conserved Domains (3) summary
    PTZ00169
    Location:331 → 604
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:515 → 607
    Mito_carr; Mitochondrial carrier protein
    pfam13499
    Location:16 → 80
    EF-hand_7; EF-hand domain pair

  2. XM_014940301.1 → XP_014795787.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X2

    Conserved Domains (3) summary
    PTZ00169
    Location:336 → 609
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:520 → 612
    Mito_carr; Mitochondrial carrier protein
    pfam13499
    Location:21 → 85
    EF-hand_7; EF-hand domain pair

  3. XM_014940299.1 → XP_014795785.1  calcium-binding mitochondrial carrier protein Aralar2 isoform X1

    Conserved Domains (3) summary
    PTZ00169
    Location:341 → 614
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:525 → 617
    Mito_carr; Mitochondrial carrier protein
    pfam13499
    Location:26 → 90
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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