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ZNF316 zinc finger protein 316 [ Equus asinus (ass) ]

Gene ID: 106840533, updated on 13-Mar-2024

Summary

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Gene symbol
ZNF316
Gene description
zinc finger protein 316
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 14 NC_052190.1 (1940508..1955055)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638132.1 (1911014..1941233)

Chromosome 14 - NC_052190.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 15 Neighboring gene zinc finger protein 853 Neighboring gene zinc finger protein 12-like Neighboring gene zinc finger protein 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 316

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052190.1 Reference ASM1607732v2

    Range
    1940508..1955055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044746460.1 → XP_044602395.1  LOW QUALITY PROTEIN: zinc finger protein 316

    UniProtKB/TrEMBL
    A0A9L0IZA7
    Conserved Domains (3) summary
    smart00349
    Location:142 → 202
    KRAB; krueppel associated box
    COG5048
    Location:743 → 930
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:830 → 850
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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