U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CCDC80 coiled-coil domain containing 80 [ Equus asinus (ass) ]

Gene ID: 106829512, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CCDC80
Gene description
coiled-coil domain containing 80
See related
Ensembl:ENSEASG00005011418
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 5 NC_052181.1 (97337537..97372429)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637245.1 (3900737..3935599)

Chromosome 5 - NC_052181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123286087 Neighboring gene uncharacterized LOC123286086 Neighboring gene uncharacterized LOC123286088 Neighboring gene solute carrier family 35 member A5 Neighboring gene autophagy related 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
coiled-coil domain-containing protein 80

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052181.1 Reference ASM1607732v2

    Range
    97337537..97372429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014838655.2 → XP_014694141.1  coiled-coil domain-containing protein 80

    UniProtKB/TrEMBL
    A0A8C4LST2, A0A9L0JWZ1
    Conserved Domains (2) summary
    pfam13778
    Location:776 → 905
    DUF4174; Domain of unknown function (DUF4174)
    cl22974
    Location:385 → 479
    HpaP; Type III secretion protein (HpaP)

  2. XM_014838656.2 → XP_014694142.1  coiled-coil domain-containing protein 80

    UniProtKB/TrEMBL
    A0A8C4LST2, A0A9L0JWZ1
    Conserved Domains (2) summary
    pfam13778
    Location:776 → 905
    DUF4174; Domain of unknown function (DUF4174)
    cl22974
    Location:385 → 479
    HpaP; Type III secretion protein (HpaP)

  3. XM_014838657.2 → XP_014694143.1  coiled-coil domain-containing protein 80

    UniProtKB/TrEMBL
    A0A8C4LST2, A0A9L0JWZ1
    Conserved Domains (2) summary
    pfam13778
    Location:776 → 905
    DUF4174; Domain of unknown function (DUF4174)
    cl22974
    Location:385 → 479
    HpaP; Type III secretion protein (HpaP)

  4. XM_014838658.2 → XP_014694144.1  coiled-coil domain-containing protein 80

    UniProtKB/TrEMBL
    A0A8C4LST2, A0A9L0JWZ1
    Related
    ENSEASP00005016483.1, ENSEAST00005017908.2
    Conserved Domains (2) summary
    pfam13778
    Location:776 → 905
    DUF4174; Domain of unknown function (DUF4174)
    cl22974
    Location:385 → 479
    HpaP; Type III secretion protein (HpaP)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.