U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DQX1 DEAQ-box RNA dependent ATPase 1 [ Equus asinus (ass) ]

Gene ID: 106823870, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DQX1
Gene description
DEAQ-box RNA dependent ATPase 1
See related
Ensembl:ENSEASG00005010654
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 6 NC_052182.1 (64272722..64281051, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638534.1 (72939..79991)

Chromosome 6 - NC_052182.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 1 Neighboring gene T-cell leukemia homeobox protein 2-like Neighboring gene T cell leukemia homeobox 2 Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene HtrA serine peptidase 2 Neighboring gene lysyl oxidase like 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ATP-dependent RNA helicase DQX1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052182.1 Reference ASM1607732v2

    Range
    64272722..64281051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044772723.1 → XP_044628658.1  ATP-dependent RNA helicase DQX1 isoform X3

    Conserved Domains (1) summary
    COG1643
    Location:1 → 489
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_014829826.2 → XP_014685312.1  ATP-dependent RNA helicase DQX1 isoform X2

    Conserved Domains (5) summary
    smart00487
    Location:41 → 228
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:462 → 527
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:65 → 204
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cl22853
    Location:17 → 77
    Motor_domain; Myosin and Kinesin motor domain
    pfam07717
    Location:562 → 671
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

  3. XM_014829825.2 → XP_014685311.1  ATP-dependent RNA helicase DQX1 isoform X1

    UniProtKB/TrEMBL
    A0A8C4LSY8
    Related
    ENSEASP00005015266.2, ENSEAST00005016604.2
    Conserved Domains (5) summary
    smart00487
    Location:41 → 228
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:467 → 532
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:65 → 204
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cl22853
    Location:17 → 77
    Motor_domain; Myosin and Kinesin motor domain
    pfam07717
    Location:567 → 676
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

RNA

  1. XR_006529346.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.