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TMEM109 transmembrane protein 109 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 106722323, updated on 13-Mar-2024

Summary

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Gene symbol
TMEM109
Gene description
transmembrane protein 109
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See TMEM109 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842176.1 (1417121..1423208, complement)

NW_005842176.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 15 member 3 Neighboring gene transmembrane protein 132A Neighboring gene pre-mRNA processing factor 19 Neighboring gene zona pellucida glycoprotein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842176 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to gamma radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 109

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842176.1 Reference ASM45574v1 Primary Assembly

    Range
    1417121..1423208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014521045.2 → XP_014376531.2  transmembrane protein 109 isoform X1

    UniProtKB/TrEMBL
    A0A1U8D845
    Conserved Domains (1) summary
    pfam14965
    Location:98 → 272
    BRI3BP; Negative regulator of p53/TP53

  2. XM_014521041.2 → XP_014376527.1  transmembrane protein 109 isoform X5

    UniProtKB/TrEMBL
    A0A1U8D5E5
    Conserved Domains (1) summary
    pfam14965
    Location:68 → 242
    BRI3BP; Negative regulator of p53/TP53

  3. XM_014521042.2 → XP_014376528.1  transmembrane protein 109 isoform X6

    UniProtKB/TrEMBL
    A0A1U8D5G3
    Conserved Domains (1) summary
    pfam14965
    Location:67 → 241
    BRI3BP; Negative regulator of p53/TP53

  4. XM_014521043.2 → XP_014376529.2  transmembrane protein 109 isoform X2

    UniProtKB/TrEMBL
    A0A1U8DFP3
    Conserved Domains (1) summary
    pfam14965
    Location:97 → 271
    BRI3BP; Negative regulator of p53/TP53

  5. XM_025206947.1 → XP_025062732.1  transmembrane protein 109 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GTH5
    Conserved Domains (1) summary
    pfam14965
    Location:82 → 256
    BRI3BP; Negative regulator of p53/TP53

  6. XM_014521040.2 → XP_014376526.1  transmembrane protein 109 isoform X3

    UniProtKB/TrEMBL
    A0A1U8D840
    Conserved Domains (1) summary
    pfam14965
    Location:83 → 257
    BRI3BP; Negative regulator of p53/TP53

  7. XM_014521046.2 → XP_014376532.1  transmembrane protein 109 isoform X7

    UniProtKB/TrEMBL
    A0A1U8D5F0
    Conserved Domains (1) summary
    pfam14965
    Location:55 → 229
    BRI3BP; Negative regulator of p53/TP53

  8. XM_014521044.2 → XP_014376530.1  transmembrane protein 109 isoform X7

    UniProtKB/TrEMBL
    A0A1U8D5F0
    Conserved Domains (1) summary
    pfam14965
    Location:55 → 229
    BRI3BP; Negative regulator of p53/TP53
Nucleotide Protein
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