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plpp3 phospholipid phosphatase 3 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106584209, updated on 13-Mar-2024

Summary

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Gene symbol
plpp3
Gene description
phospholipid phosphatase 3
See related
Ensembl:ENSSSAG00000111769
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa23
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa23 NC_059464.1 (22481014..22530059, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa23 NC_027322.1 (22152565..22193600, complement)

Chromosome ssa23 - NC_059464.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 24 Neighboring gene biogenesis of lysosomal organelles complex-1, subunit 2 Neighboring gene FYN-binding protein 1 Neighboring gene protein kinase, AMP-activated, alpha 2 catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059464.1 Reference Ssal_v3.1

    Range
    22481014..22530059 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014169241.2 → XP_014024716.1  phospholipid phosphatase 3 isoform X2

    UniProtKB/TrEMBL
    A0A1S3KHY8, A0A1S3PAX7
    Related
    ENSSSAP00000165141.1, ENSSSAT00000241627.1
    Conserved Domains (1) summary
    cd03384
    Location:116 → 261
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  2. XM_014169240.2 → XP_014024715.1  phospholipid phosphatase 3 isoform X1

    UniProtKB/TrEMBL
    A0A1S3KJ55, A0A1S3PAP0
    Related
    ENSSSAP00000143754.1, ENSSSAT00000179903.1
    Conserved Domains (1) summary
    cd03384
    Location:117 → 262
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein
Heading Accession and Version

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