U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

xrra1 X-ray radiation resistance associated 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106563417, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
xrra1
Gene description
X-ray radiation resistance associated 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: ssa11
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa11 NC_059452.1 (92045860..92055942, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa11 NC_027310.1 (77398771..77406234, complement)

Chromosome ssa11 - NC_059452.1Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 7 Neighboring gene chordin-like protein 2 Neighboring gene sialidase-3 Neighboring gene WD repeat domain 73

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Extensive local gene duplication and functional divergence among paralogs in Atlantic salmon. Warren IA, et al. Genome Biol Evol, 2014 Jun 19. PMID 24951567, Free PMC Article
  2. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
X-ray radiation resistance-associated protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059452.1 Reference Ssal_v3.1

    Range
    92045860..92055942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014128971.2 → XP_013984446.2  X-ray radiation resistance-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3L0U6

  2. XM_045690069.1 → XP_045546025.1  X-ray radiation resistance-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1S3L0E9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.