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OGDHL oxoglutarate dehydrogenase L [ Thamnophis sirtalis ]

Gene ID: 106557100, updated on 13-Mar-2024

Summary

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Gene symbol
OGDHL
Gene description
oxoglutarate dehydrogenase L
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657773.1 (2060432..2071851, complement)

NW_013657773.1Genomic Context describing neighboring genes Neighboring gene choline O-acetyltransferase Neighboring gene chromosome unknown open reading frame, human C10orf53

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657773.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate dehydrogenase-like, mitochondrial
Names
oxoglutarate dehydrogenase like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657773.1 Reference Thamnophis_sirtalis-6.0

    Range
    2060432..2071851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014076226.1 → XP_013931701.1  2-oxoglutarate dehydrogenase-like, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9Z731
    Conserved Domains (2) summary
    pfam16870
    Location:137 → 280
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal
    cl11410
    Location:1 → 130
    TPP_enzyme_PYR; Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes
Nucleotide Protein
Heading Accession and Version

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