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UBXN2A UBX domain protein 2A [ Thamnophis sirtalis ]

Gene ID: 106552068, updated on 13-Mar-2024

Summary

Gene symbol
UBXN2A
Gene description
UBX domain protein 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
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Genomic context

See UBXN2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013659557.1 (93971..113019)

NW_013659557.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 25 Neighboring gene growth differentiation factor 15 Neighboring gene MFSD2 lysolipid transporter B, sphingolipid Neighboring gene WD repeat and coiled-coil-containing protein C2orf44 homolog

Genomic regions, transcripts, and products

Genomic Sequence:
NW_013659557.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
UBX domain-containing protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659557.1 Reference Thamnophis_sirtalis-6.0

    Range
    93971..113019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014070259.1XP_013925734.1  UBX domain-containing protein 2A

    UniProtKB/TrEMBL
    A0A6I9YPA2
    Conserved Domains (2) summary
    cd01770
    Location:167245
    p47_UBX; p47-like ubiquitin domain
    pfam08059
    Location:61134
    SEP; SEP domain