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IGSF10 immunoglobulin superfamily member 10 [ Thamnophis sirtalis ]

Gene ID: 106549465, updated on 13-Mar-2024

Summary

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Gene symbol
IGSF10
Gene description
immunoglobulin superfamily member 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013659001.1 (42513..75448)

NW_013659001.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 12L Neighboring gene SET domain containing 4 Neighboring gene carbonyl reductase [NADPH] 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013659001.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily member 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659001.1 Reference Thamnophis_sirtalis-6.0

    Range
    42513..75448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014067124.1 → XP_013922599.1  immunoglobulin superfamily member 10

    Conserved Domains (9) summary
    cd00096
    Location:2561 → 2627
    Ig; Immunoglobulin domain
    smart00408
    Location:1870 → 1939
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:495 → 578
    IG; Immunoglobulin
    smart00410
    Location:2360 → 2442
    IG_like; Immunoglobulin like
    pfam07679
    Location:1759 → 1851
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:70 → 92
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:92 → 151
    LRR_8; Leucine rich repeat
    cl11960
    Location:1683 → 1754
    Ig; Immunoglobulin domain
    cl15307
    Location:229 → 290
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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