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DCP1A decapping mRNA 1A [ Thamnophis sirtalis ]

Gene ID: 106541464, updated on 13-Mar-2024

Summary

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Gene symbol
DCP1A
Gene description
decapping mRNA 1A
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013658046.1 (401031..428513, complement)

NW_013658046.1Genomic Context describing neighboring genes Neighboring gene BICD cargo adaptor 2 Neighboring gene transmembrane protein 40 Neighboring gene transketolase Neighboring gene actin related protein 8 Neighboring gene selenoprotein K

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013658046.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA-decapping enzyme 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013658046.1 Reference Thamnophis_sirtalis-6.0

    Range
    401031..428513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014056930.1 → XP_013912405.1  mRNA-decapping enzyme 1A

    UniProtKB/TrEMBL
    A0A6I9Y4L6
    Conserved Domains (2) summary
    cd09804
    Location:6 → 126
    Dcp1; mRNA decapping enzyme 1 (Dcp1)
    pfam16741
    Location:530 → 572
    mRNA_decap_C; mRNA-decapping enzyme C-terminus
Nucleotide Protein
Heading Accession and Version

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