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smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 [ Austrofundulus limnaeus ]

Gene ID: 106536731, updated on 13-Mar-2024

Summary

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Gene symbol
smug1
Gene description
single-strand-selective monofunctional uracil-DNA glycosylase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013954353.1 (7780..10239)

NW_013954353.1Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF8.2DB-like Neighboring gene gastrula zinc finger protein XlCGF9.1-like Neighboring gene uncharacterized LOC106536732 Neighboring gene EH-domain containing 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013954353.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-strand selective uracil DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-strand selective monofunctional uracil DNA glycosylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013954353.1 Reference Austrofundulus_limnaeus-1.0

    Range
    7780..10239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014034053.1 → XP_013889507.1  single-strand selective monofunctional uracil DNA glycosylase

    UniProtKB/TrEMBL
    A0A2I4DBA0
    Conserved Domains (1) summary
    cd10029
    Location:39 → 271
    UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase
Nucleotide Protein
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