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apbb2b amyloid beta (A4) precursor protein-binding, family B, member 2b [ Austrofundulus limnaeus ]

Gene ID: 106520911, updated on 12-Sep-2024

Summary

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Gene symbol
apbb2b
Gene description
amyloid beta (A4) precursor protein-binding, family B, member 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Also known as
apbb2
Orthologs
zebrafish all
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Genomic context

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See apbb2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952501.1 (306238..349078, complement)

NW_013952501.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 47 Neighboring gene uncharacterized LOC106520910 Neighboring gene NOP2/Sun RNA methyltransferase family member 7 Neighboring gene histone H3 associated protein kinase Neighboring gene family with sequence similarity 184 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952501.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid beta A4 precursor protein-binding family B member 2
Names
amyloid beta precursor protein binding family B member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952501.1 Reference Austrofundulus_limnaeus-1.0

    Range
    306238..349078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014013221.1 → XP_013868675.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X3

    UniProtKB/TrEMBL
    A0A2I4BLQ7
    Conserved Domains (3) summary
    cd01271
    Location:721 → 847
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:554 → 693
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:357 → 385
    WW; WW domain

  2. XM_014013219.1 → XP_013868673.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I4BLS5
    Conserved Domains (3) summary
    cd01271
    Location:723 → 849
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:556 → 695
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:357 → 385
    WW; WW domain

  3. XM_014013223.1 → XP_013868677.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X4

    UniProtKB/TrEMBL
    A0A2I4BLR0
    Conserved Domains (3) summary
    cd01271
    Location:706 → 832
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:539 → 678
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:357 → 385
    WW; WW domain

  4. XM_014013220.1 → XP_013868674.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I4BLQ3
    Conserved Domains (3) summary
    cd01271
    Location:721 → 847
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cd01272
    Location:556 → 693
    PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
    pfam00397
    Location:357 → 385
    WW; WW domain

  5. XM_014013225.1 → XP_013868679.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X6

    UniProtKB/TrEMBL
    A0A2I4BLQ8
    Conserved Domains (1) summary
    cd01271
    Location:33 → 159
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain

  6. XM_014013224.1 → XP_013868678.1  amyloid beta A4 precursor protein-binding family B member 2 isoform X5

    UniProtKB/TrEMBL
    A0A2I4BLT0
    Conserved Domains (2) summary
    cd01271
    Location:118 → 244
    PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
    cl17171
    Location:46 → 90
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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