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gcc2 GRIP and coiled-coil domain containing 2 [ Austrofundulus limnaeus ]

Gene ID: 106519711, updated on 12-Sep-2024

Summary

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Gene symbol
gcc2
Gene description
GRIP and coiled-coil domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952483.1 (275391..298698, complement)

NW_013952483.1Genomic Context describing neighboring genes Neighboring gene RAN binding protein 2 Neighboring gene LIM and senescent cell antigen-like domains 2 Neighboring gene transmembrane protein 223 Neighboring gene high-affinity choline transporter 1-like Neighboring gene claudin-14-like Neighboring gene F-box protein 47

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952483.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GRIP and coiled-coil domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952483.1 Reference Austrofundulus_limnaeus-1.0

    Range
    275391..298698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014011489.1 → XP_013866943.1  GRIP and coiled-coil domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I4BGR9
    Conserved Domains (3) summary
    COG1196
    Location:545 → 1427
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01465
    Location:1578 → 1620
    GRIP; GRIP domain
    pfam16704
    Location:1512 → 1576
    Rab_bind; Rab binding domain

  2. XM_014011490.1 → XP_013866944.1  GRIP and coiled-coil domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I4BGR9
    Conserved Domains (3) summary
    COG1196
    Location:545 → 1427
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam01465
    Location:1578 → 1620
    GRIP; GRIP domain
    pfam16704
    Location:1512 → 1576
    Rab_bind; Rab binding domain
Nucleotide Protein
Heading Accession and Version

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